RID source papers


- Show sample information of the paper

Pubmed_IDTitleAuthorJournalYearComments
28811663 Show samples for pubmed id 28811663Monitoring Molecular Response in Adult T-cell Leukemia/Lymphoma by High-Throughput Sequencing Clonality Analysis..Artesi, M et al.Leukemia2017 
24735963 Show samples for pubmed id 24735963The role of HTLV-1 clonality, proviral structure, and genomic integration site in adult T-cell leukemiaCook, LB et al.Blood2014 
24501411 Show samples for pubmed id 24501411Enhancers are major targets for murine leukemia virus vector integrationDe Ravin, SS et al.J Virol2014 
29186194 Show samples for pubmed id 29186194Human T-cell leukemia virus type 1 infects multiple lineage hematopoietic cells in vivoFuruta, R et al.PLoS Pathog.2017Integration sites were mapped to hg38 by the authors. To make it consistent with RID, the sites have been converted to hg19. 137 sites were not found in hg19
15163705 Show samples for pubmed id 15163705Resting CD4+ T cells from human immunodeficiency virus type 1 (HIV-1)-infected individuals carry integrated HIV-1 genomes within actively transcribed host genesHan, Y et al.J Virol2004 
17262715 Show samples for pubmed id 17262715Recurrent HIV-1 integration at the BACH2 locus in resting CD4+ T cell populations during effective highly active antiretroviral therapyIkeda, T et al.J Infect Dis.2007 
24464997 Show samples for pubmed id 24464997MLV integration site selection is driven by strong enhancers and active promotersLaFave, MC et al.Nucleic Acids Res2014 
12843741 Show samples for pubmed id 12843741HIV insertions within and proximal to host cell genes are a common finding in tissues containing high levels of HIV DNA and macrophage-associated p24 antigen expressionMack, KD et al.J Acquir Immune Defic Syndr.2003 
24968937 Show samples for pubmed id 24968937HIV latency. Specific HIV integration sites are linked to clonal expansion and persistence of infected cellsMaldarelli, F et al.Science2014When both ends of a particular provirus were isolated, the two ends were counted as a single integration site.
29099869 Show samples for pubmed id 29099869Selection for avian leukosis virus integration sites determines the clonal progression of B-cell lymphomasMalhotra, S et al.PLoS Pathog.2017 
23953889 Show samples for pubmed id 23953889HIV latency and integration site placement in five cell-based modelsSherrill-Mix, S et al.Retrovirology2013 
26545813 Show samples for pubmed id 26545813LEDGF/p75 interacts with mRNA splicing factors and targets HIV-1 integration to highly spliced genesSingh, PK et al.Genes Dev.2015 
SRP065157 Show samples for pubmed id SRP065157direct submission to Genbank SRP065157 by Parmit Kumar Singh, Andrea Ferris, Stephen H. Hughes and Henry L. LevinSingh, PK et al.NA2015 
26912621 Show samples for pubmed id 26912621HIV Integration Site Analysis of Cellular Models of HIV Latency with a Probe-Enriched Next-Generation Sequencing AssaySunshine, S et al.J Virol.2016 
25011556 Show samples for pubmed id 25011556HIV latency. Proliferation of cells with HIV integrated into cancer genes contributes to persistent infectionWagner, TA et al.Science2014